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среда, 8 октября 2014 г.

Analyses of an ancient English genome

Below are the results of analyses of the sample ERS389795. This sample is one of five Iron Age and Anglo-Saxon samples from Hinxton, England that are analyzed in a paper that has not yet been published, but whose abstract is here.
The data indicate that ERS389795 was male. The Y-SNP calls don’t show which Y haplogroup ERS389795 belonged to, but they do show that he didn’t belong to haplogroups E, G, I1, J, R1a1, or T1a.
The mt-SNP calls show that ERS389795 belonged to mitochondrial haplogroup K1a1.
ERS389795 only had 0.08% of the K12b Gedrosia component, which indicates that he didn’t belong to Y haplogroup R1b. The modern-day English have on average 10.6% of the Gedrosia component.
globe4
  • 85.44% European
  • 8.40% Amerindian
  • 4.29% African
  • 1.87% Asian

globe10
  • 72.39% Atlantic_Baltic
  • 10.51% Southern
  • 5.16% Neo_African
  • 5.07% West_Asian
  • 3.12% Siberian
  • 2.55% Amerindian
  • 0.97% Australasian
  • 0.20% South_Asian
  • 0.03% East_Asian
  • 0.00% Palaeo_African
globe13
  • 54.47% North_European
  • 24.52% Mediterranean
  • 6.60% Southwest_Asian
  • 4.46% West_African
  • 3.54% West_Asian
  • 2.74% Siberian
  • 2.55% Amerindian
  • 0.67% Australasian
  • 0.44% East_African
  • 0.00% Arctic
  • 0.00% East_Asian
  • 0.00% Palaeo_African
  • 0.00% South_Asian
K7b
  • 75.10% Atlantic_Baltic
  • 9.16% Southern
  • 6.64% West_Asian
  • 3.97% African
  • 3.48% Siberian
  • 1.64% East_Asian
  • 0.01% South_Asian
K10a
  • 62.51% Atlantic_Baltic
  • 22.84% Mediterranean
  • 3.57% Sub_Saharan
  • 3.43% West_Asian
  • 3.03% East_Asian
  • 2.19% Red_Sea
  • 2.02% Siberian
  • 0.25% South_Asian
  • 0.15% Palaeoafrican
  • 0.00% Southeast_Asian
K12b
  • 49.89% North_European
  • 30.08% Atlantic_Med
  • 9.78% Caucasus
  • 3.63% East_Asian
  • 3.19% Sub_Saharan
  • 1.31% Northwest_African
  • 1.16% Siberian
  • 0.79% East_African
  • 0.08% Gedrosia
  • 0.07% South_Asian
  • 0.00% Southeast_Asian
  • 0.00% Southwest_Asian
dv3
  • 41.46% West_European
  • 24.44% East_European
  • 17.31% Mediterranean
  • 5.55% Northwest_African
  • 3.17% South_Asian
  • 2.69% Palaeo_African
  • 1.70% West_Asian
  • 1.21% Northeast_Asian
  • 0.99% Southeast_Asian
  • 0.85% Southwest_Asian
  • 0.63% Neo_African
  • 0.00% East_African
MDLP K=5
  • 48.32% West-Eurasian
  • 34.64% Paleo-mediterranean
  • 7.27% East-Eurasian
  • 6.59% Caucasian
  • 3.17% South-Asian
MDLP K=6
  • 53.33% West-Eurasian
  • 27.98% Paleo-Mediterranean
  • 7.02% East-Euroasian
  • 5.17% Caucasian
  • 3.59% South-Asian
  • 2.92% North-West-Eurasian
MDLP K=7
  • 53.00% West-Eurasian
  • 27.23% Paleo-Mediterranean
  • 6.98% Altaic-Turkic
  • 5.04% Caucasian
  • 4.15% Paleo-Scandinavian
  • 3.59% South-Central-Asian
  • 0.02% Volga-Uralic
MDLP K=8
  • 45.18% East-European
  • 21.98% West-European
  • 17.98% Paleo-Mediterranean
  • 6.04% Altaic-Turkic
  • 4.24% Paleo-Scandinavian
  • 3.66% South-Central-Asian
  • 0.90% Caucasian
  • 0.01% Volga-Finnic
MDLP K=9
  • 44.19% East-European
  • 21.33% West-European
  • 17.61% Paleo-Mediterranean
  • 5.98% Altaic-Turkic
  • 4.24% Paleo-Scandinavian
  • 3.60% South-Central-Asian
  • 1.98% Paleo-Balkanic
  • 1.05% Caucasian
  • 0.02% Volga-Finnic
MDLP K=10
  • 35.25% East-European
  • 28.32% British
  • 19.17% Paleo-Mediterranean
  • 5.73% Altaic-Turkic
  • 4.50% Paleo-North-European
  • 3.31% South-Central-Asian
  • 1.97% Paleo-Balkanic
  • 1.71% Iberian
  • 0.02% Caucasian
  • 0.01% Volga-Finnic
MDLP K=11
  • 34.90% East-European
  • 27.42% Celto-Germanic
  • 19.08% Mediterranean
  • 5.13% Altaic-Turkic
  • 4.62% Paleo-North-European
  • 2.97% South-Central-Asian
  • 2.59% Uralic-Permic
  • 1.94% Paleo-Balkanic
  • 1.33% Iberian
  • 0.02% Caucasian
  • 0.00% Volga-Uralic
MDLP K=12
  • 26.46% Celto-Germanic
  • 22.97% East-European
  • 20.22% Balto-Finnic
  • 17.82% Paleo-Mediterranean
  • 3.76% Alatic-Turkic
  • 2.77% Uralic-Permic
  • 2.73% South-Central Asian
  • 1.73% Paleo-Balkanic
  • 0.85% Iberian
  • 0.68% Paleo-North-European
  • 0.01% Caucasian
  • 0.00% Volga-Uralic
MDLP K=13
  • 21.36% Altaic
  • 14.03% Celto-Germanic
  • 12.13% East-Mediterranean
  • 11.80% Mediterrean
  • 10.35% Baltic-Finnic
  • 9.67% Iberian
  • 8.70% Paleo-Mediterranean
  • 4.65% South-Central-Asian
  • 3.08% Uralic-Permic
  • 2.60% Paleo-North-European
  • 1.32% Caucasian
  • 0.29% East-European
  • 0.00% Volga-Uralic
MDLP K=14
  • 22.38% Celto-Germanic
  • 20.15% Balto-Slavic
  • 18.92% Balto-Finnic
  • 13.30% East-Mediterranean
  • 12.79% Paleo-Mediterranean
  • 4.07% Mediterranean
  • 3.51% Altaic
  • 2.22% Uralic-Permic
  • 1.32% Paleo-Balkanic
  • 1.01% South-Central-Asian
  • 0.33% Paleo-Scandinavian
  • 0.00% Caucasian
  • 0.00% Iberian
  • 0.00% Volga-Finnic
MDLP K=15
  • 22.46% Celto-Germanic
  • 20.23% Balto-Slavic
  • 18.88% Balto-Finnic
  • 13.40% East-Mediterranean
  • 12.52% West-Mediterranean
  • 3.88% Balkanic-1
  • 3.79% West-Altaic
  • 2.29% Uralic-Permic
  • 1.35% Balkanic-2
  • 0.95% South-Central-Asian
  • 0.25% Paleo-North-European
  • 0.00% Caucasian
  • 0.00% East-Altaic
  • 0.00% Iberian
  • 0.00% Volga-Uralic
MDLP World-22
  • 32.96% North-East-European
  • 29.61% Atlantic_Mediterranean_Neolithic
  • 14.30% North-European-Mesolithic
  • 6.27% Mesoamerican
  • 5.42% Indian
  • 4.48% Pygmy
  • 3.46% Near_East
  • 2.91% Indo-Iranian
  • 0.40% Indo-Tibetan
  • 0.13% South-African
  • 0.06% East-Siberean
  • 0.01% South-America_Amerind
  • 0.00% Arctic-Amerind
  • 0.00% Austronesian
  • 0.00% East-South-Asian
  • 0.00% Melanesian
  • 0.00% North-Amerind
  • 0.00% North-Siberean
  • 0.00% Paleo-Siberian
  • 0.00% Samoedic
  • 0.00% Sub-Saharian
  • 0.00% West-Asian
MDLP Ancient Roots K17
  • 45.66% Ancestral_East_European_ANE
  • 23.08% West_European_HG
  • 16.70% Ancestral_Mediterranean_EEF
  • 3.16% Caucasian-Basal
  • 2.29% Uralic
  • 2.22% Ancestral_East_Siberian
  • 1.81% Melano-Austronesian
  • 1.39% Ancestral_South_Indian
  • 1.31% African_Sub_Saharian
  • 0.73% Ancestral_North_Indian
  • 0.45% Archaic_African
  • 0.45% Near-East-Basal
  • 0.35% Ancestral_West_Siberian
  • 0.28% Circumpolar
  • 0.07% South_East_Asian
  • 0.05% Amerindian
  • 0.01% Ancestral_Sami-Finnic
MDLP Ancient Roots K18
  • 48.40% North_West_European
  • 20.94% East_European
  • 9.71% Afroasiatic
  • 4.84% East_Siberian
  • 3.74% Roma
  • 3.48% Mediterranean
  • 2.30% West_Siberian
  • 2.11% Volga-Uralic
  • 1.89% South_Central_Asian
  • 1.78% Archaic_African
  • 0.80% East_African
  • 0.01% Caucasian
  • 0.00% Amerindian
  • 0.00% Arctic
  • 0.00% Melano-Austronesian
  • 0.00% Sami-Finnic
  • 0.00% South_East_Asian
  • 0.00% South_Indian
MDLP K23b
  • 35.13% European_Hunters_Gatherers
  • 31.41% Caucasian
  • 19.44% European_Early_Farmers
  • 6.42% Ancestral-North-Eurasian
  • 2.41% Ancestral-North-Indian
  • 2.24% Archaic-Human
  • 1.29% African-Pygmy
  • 0.75% East-African
  • 0.49% Near-East
  • 0.22% East-Siberian
  • 0.11% Ancestral-South-Indian
  • 0.05% Archaic-African
  • 0.04% North-African
  • 0.00% Altaiс
  • 0.00% Amerindian
  • 0.00% Arctic
  • 0.00% Austroloid
  • 0.00% Austronesian
  • 0.00% Khoisan
  • 0.00% Melano-Polinesian
  • 0.00% Paleo-Siberian
  • 0.00% South-East-Asian
  • 0.00% Subsaharian
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