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четверг, 9 октября 2014 г.

Analyses of a second ancient English genome

Below are the results of analyses of ERS389796, the second of the five Iron Age and Anglo-Saxon samples from Hinxton, England.
The data indicate that ERS389796 was female. The mt-SNP calls show that she belonged to mitochondrial haplogroup H2a2b1.
ERS389796 had the ancestral allele of the SNP rs1805005 in the gene MC1R. The derived allele of this SNP is associated with light blond hair and fair skin.
ERS389796 had 6.53% of the K12b Gedrosia component, which indicates that, unlike ERS389795, she had some admixture from R1b people.
ERS389796 had significantly more of the Iberian components in the MDLP calculators than ERS389795.
globe4
  • 86.40% European
  • 7.26% Amerindian
  • 6.34% African
  • 0.00% Asian

globe10
  • 80.46% Atlantic_Baltic
  • 6.20% Neo_African
  • 4.93% West_Asian
  • 4.11% Southern
  • 2.98% Australasian
  • 0.68% Amerindian
  • 0.64% Palaeo_African
  • 0.00% East_Asian
  • 0.00% Siberian
  • 0.00% South_Asian
globe13
  • 56.60% North_European
  • 29.55% Mediterranean
  • 5.04% West_African
  • 4.36% West_Asian
  • 2.69% Australasian
  • 1.25% East_African
  • 0.30% Palaeo_African
  • 0.21% Amerindian
  • 0.00% Arctic
  • 0.00% East_Asian
  • 0.00% Siberian
  • 0.00% South_Asian
  • 0.00% Southwest_Asian
K7b
  • 77.30% Atlantic_Baltic
  • 8.36% West_Asian
  • 7.55% Southern
  • 5.88% African
  • 0.91% South_Asian
  • 0.00% East_Asian
  • 0.00% Siberian
K10a
  • 62.83% Atlantic_Baltic
  • 25.64% Mediterranean
  • 5.56% Sub_Saharan
  • 4.38% West_Asian
  • 1.15% Palaeoafrican
  • 0.45% South_Asian
  • 0.00% East_Asian
  • 0.00% Red_Sea
  • 0.00% Siberian
  • 0.00% Southeast_Asian
K12b
  • 43.28% North_European
  • 37.61% Atlantic_Med
  • 6.63% Caucasus
  • 6.53% Gedrosia
  • 4.27% Sub_Saharan
  • 1.67% East_African
  • 0.02% South_Asian
  • 0.00% East_Asian
  • 0.00% Northwest_African
  • 0.00% Siberian
  • 0.00% Southeast_Asian
  • 0.00% Southwest_Asian
dv3
  • 61.87% West_European
  • 16.31% Mediterranean
  • 9.56% West_Asian
  • 6.34% East_African
  • 3.60% Palaeo_African
  • 1.35% East_European
  • 0.59% Neo_African
  • 0.37% Northeast_Asian
  • 0.00% Northwest_African
  • 0.00% South_Asian
  • 0.00% Southeast_Asian
  • 0.00% Southwest_Asian
MDLP K=5
  • 43.02% Paleo-mediterranean
  • 38.50% West-Eurasian
  • 13.62% Caucasian
  • 4.85% South-Asian
  • 0.00% East-Eurasian
MDLP K=6
  • 40.13% Paleo-Mediterranean
  • 37.12% West-Eurasian
  • 12.21% Caucasian
  • 6.30% North-West-Eurasian
  • 4.25% South-Asian
  • 0.00% East-Euroasian
MDLP K=7
  • 39.30% Paleo-Mediterranean
  • 38.52% West-Eurasian
  • 11.93% Caucasian
  • 4.68% South-Central-Asian
  • 3.28% Paleo-Scandinavian
  • 2.28% Volga-Uralic
  • 0.00% Altaic-Turkic
MDLP K=8
  • 42.16% West-European
  • 24.05% East-European
  • 14.14% Caucasian
  • 13.22% Paleo-Mediterranean
  • 4.30% South-Central-Asian
  • 1.53% Volga-Finnic
  • 0.61% Paleo-Scandinavian
  • 0.00% Altaic-Turkic
MDLP K=9
  • 41.01% West-European
  • 23.41% East-European
  • 15.06% Paleo-Mediterranean
  • 13.90% Caucasian
  • 4.42% South-Central-Asian
  • 1.51% Volga-Finnic
  • 0.69% Paleo-Scandinavian
  • 0.00% Altaic-Turkic
  • 0.00% Paleo-Balkanic
MDLP K=10
  • 41.00% British
  • 17.14% Iberian
  • 15.50% Paleo-Mediterranean
  • 12.61% East-European
  • 7.49% Caucasian
  • 4.20% South-Central-Asian
  • 1.45% Volga-Finnic
  • 0.61% Paleo-North-European
  • 0.00% Altaic-Turkic
  • 0.00% Paleo-Balkanic
MDLP K=11
  • 40.48% Celto-Germanic
  • 16.02% Iberian
  • 15.55% Mediterranean
  • 11.02% East-European
  • 6.96% Caucasian
  • 6.72% Volga-Uralic
  • 3.25% South-Central-Asian
  • 0.01% Paleo-North-European
  • 0.00% Altaic-Turkic
  • 0.00% Paleo-Balkanic
  • 0.00% Uralic-Permic
MDLP K=12
  • 40.53% Celto-Germanic
  • 15.52% Iberian
  • 15.21% Paleo-Mediterranean
  • 11.27% East-European
  • 6.69% Volga-Uralic
  • 6.21% Caucasian
  • 2.93% South-Central Asian
  • 1.63% Paleo-North-European
  • 0.01% Balto-Finnic
  • 0.00% Alatic-Turkic
  • 0.00% Paleo-Balkanic
  • 0.00% Uralic-Permic
MDLP K=13
  • 22.76% Mediterrean
  • 17.46% Paleo-Mediterranean
  • 15.31% Altaic
  • 12.91% Baltic-Finnic
  • 12.47% East-Mediterranean
  • 12.44% Volga-Uralic
  • 6.14% South-Central-Asian
  • 0.38% Uralic-Permic
  • 0.14% Caucasian
  • 0.00% Celto-Germanic
  • 0.00% East-European
  • 0.00% Iberian
  • 0.00% Paleo-North-European
MDLP K=14
  • 36.99% Celto-Germanic
  • 12.17% Paleo-Mediterranean
  • 12.02% Iberian
  • 10.69% Balto-Slavic
  • 10.13% Mediterranean
  • 6.77% Caucasian
  • 6.47% Volga-Finnic
  • 2.51% South-Central-Asian
  • 1.44% Paleo-Scandinavian
  • 0.81% East-Mediterranean
  • 0.00% Altaic
  • 0.00% Balto-Finnic
  • 0.00% Paleo-Balkanic
  • 0.00% Uralic-Permic
MDLP K=15
  • 37.26% Celto-Germanic
  • 11.73% Iberian
  • 11.61% West-Mediterranean
  • 10.85% Balto-Slavic
  • 10.24% Balkanic-1
  • 6.67% Caucasian
  • 6.63% Volga-Uralic
  • 2.61% South-Central-Asian
  • 1.45% Paleo-North-European
  • 0.95% East-Mediterranean
  • 0.00% Balkanic-2
  • 0.00% Balto-Finnic
  • 0.00% East-Altaic
  • 0.00% Uralic-Permic
  • 0.00% West-Altaic
MDLP World-22
  • 46.47% North-East-European
  • 28.36% Atlantic_Mediterranean_Neolithic
  • 9.73% West-Asian
  • 3.98% North-European-Mesolithic
  • 3.42% Sub-Saharian
  • 3.09% Melanesian
  • 2.28% North-Amerind
  • 2.11% Indian
  • 0.56% Paleo-Siberian
  • 0.01% Near_East
  • 0.00% Arctic-Amerind
  • 0.00% Austronesian
  • 0.00% East-Siberean
  • 0.00% East-South-Asian
  • 0.00% Indo-Iranian
  • 0.00% Indo-Tibetan
  • 0.00% Mesoamerican
  • 0.00% North-Siberean
  • 0.00% Pygmy
  • 0.00% Samoedic
  • 0.00% South-African
  • 0.00% South-America_Amerind
MDLP Ancient Roots K17
  • 39.45% Ancestral_East_European_ANE
  • 25.93% West_European_HG
  • 14.22% Ancestral_Mediterranean_EEF
  • 5.41% Caucasian-Basal
  • 3.69% African_Sub_Saharian
  • 2.95% Circumpolar
  • 2.56% Melano-Austronesian
  • 1.81% Ancestral_North_Indian
  • 1.55% Uralic
  • 1.08% Amerindian
  • 0.79% Ancestral_Sami-Finnic
  • 0.28% Ancestral_South_Indian
  • 0.17% Ancestral_West_Siberian
  • 0.05% Ancestral_East_Siberian
  • 0.03% Archaic_African
  • 0.03% Near-East-Basal
  • 0.01% South_East_Asian
MDLP Ancient Roots K18
  • 42.31% North_West_European
  • 18.62% East_European
  • 8.99% Mediterranean
  • 7.40% Caucasian
  • 4.67% South_Central_Asian
  • 4.36% Volga-Uralic
  • 3.52% Melano-Austronesian
  • 3.27% East_African
  • 2.72% Arctic
  • 2.05% Amerindian
  • 1.11% Archaic_African
  • 0.95% Sami-Finnic
  • 0.01% Roma
  • 0.00% Afroasiatic
  • 0.00% East_Siberian
  • 0.00% South_East_Asian
  • 0.00% South_Indian
  • 0.00% West_Siberian
MDLP K23b
  • 30.23% European_Hunters_Gatherers
  • 27.84% European_Early_Farmers
  • 21.34% Caucasian
  • 9.39% Ancestral-North-Indian
  • 3.33% Archaic-African
  • 3.07% Ancestral-North-Eurasian
  • 1.96% Subsaharian
  • 1.48% Altaiс
  • 0.65% Austroloid
  • 0.38% East-Siberian
  • 0.21% Archaic-Human
  • 0.05% Austronesian
  • 0.04% Ancestral-South-Indian
  • 0.03% Near-East
  • 0.01% Paleo-Siberian
  • 0.00% African-Pygmy
  • 0.00% Amerindian
  • 0.00% Arctic
  • 0.00% East-African
  • 0.00% Khoisan
  • 0.00% Melano-Polinesian
  • 0.00% North-African
  • 0.00% South-East-Asian
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